Commit Graph

Select branches

Hide Pull Requests

active-learning-environment

adithyaakrishna-feat/more-typeSafe

dependabot/npm_and_yarn/basic-ftp-5.2.0

dependabot/npm_and_yarn/flatted-3.4.2

dependabot/npm_and_yarn/form-data-4.0.4

dependabot/npm_and_yarn/multi-0d13b2d87f

dependabot/npm_and_yarn/multi-770cfcd984

dependabot/npm_and_yarn/multi-de3d1b050a

dependabot/npm_and_yarn/picomatch-2.3.2

dkoes-patch-1

feature-eslint

feature-eslint-fix

feature-gltest

feature-modules

feature-modules-topdown

master

parser-test

parser-test2

patch-k7s3

refactor-folder-structure

revert-227-master

tests

tsport-colors-and-gradients

tsport-core

tsport-labels

tsport-labels-and-partial-charges

tsport-marchingcube

tsport-math-and-shapes

tsport-organize-src

tsport-parsers

tsport-partial-charges

tsport-sprite-plugin

tsport-tsdoc

tsport-webgl

tsport/specs

ui

#1

#104

#105

#106

#107

#109

#111

#114

#115

#117

#119

#119

#120

#122

#123

#124

#125

#126

#128

#131

#134

#136

#14

#14

#142

#144

#145

#15

#154

#157

#157

#158

#158

#159

#159

#16

#160

#160

#161

#168

#169

#17

#170

#178

#18

#180

#182

#183

#187

#190

#192

#193

#195

#197

#198

#199

#201

#203

#206

#207

#208

#209

#211

#212

#213

#214

#215

#220

#222

#223

#226

#227

#228

#230

#231

#235

#242

#243

#244

#245

#247

#249

#25

#251

#252

#253

#256

#257

#259

#26

#264

#268

#27

#272

#273

#28

#28

#280

#282

#284

#286

#289

#296

#298

#302

#303

#307

#308

#31

#311

#313

#314

#318

#319

#320

#321

#321

#322

#323

#324

#325

#326

#327

#328

#329

#331

#332

#333

#334

#335

#336

#34

#353

#353

#356

#357

#36

#374

#375

#375

#38

#383

#395

#396

#399

#40

#400

#401

#405

#407

#408

#409

#41

#410

#411

#412

#413

#414

#42

#420

#423

#424

#425

#426

#427

#43

#43

#436

#438

#44

#442

#443

#444

#445

#447

#452

#459

#46

#46

#465

#467

#468

#471

#474

#476

#486

#488

#490

#496

#502

#503

#507

#509

#51

#510

#511

#514

#515

#516

#522

#523

#524

#527

#528

#529

#53

#531

#533

#534

#536

#539

#541

#546

#555

#556

#56

#564

#565

#566

#57

#571

#577

#578

#58

#586

#587

#588

#589

#59

#590

#591

#592

#596

#597

#60

#60

#602

#604

#606

#607

#608

#609

#610

#611

#612

#613

#614

#615

#616

#617

#62

#620

#621

#623

#628

#629

#63

#631

#637

#64

#641

#650

#654

#655

#656

#657

#659

#66

#662

#663

#665

#667

#669

#670

#675

#677

#679

#68

#680

#683

#684

#686

#687

#688

#689

#69

#690

#691

#694

#695

#697

#698

#699

#700

#702

#703

#706

#711

#712

#713

#714

#715

#716

#717

#718

#719

#72

#720

#722

#725

#728

#731

#740

#749

#753

#754

#756

#760

#761

#762

#765

#769

#77

#778

#780

#782

#783

#785

#788

#789

#791

#796

#797

#80

#806

#814

#815

#831

#837

#837

#84

#842

#843

#844

#844

#845

#846

#847

#848

#850

#851

#851

#852

#853

#853

#854

#854

#856

#856

#857

#857

#87

#89

#92

#94

#95

#96

#96

#97

1.0.2

1.0.3

1.0.4

1.0.5

1.0.6

1.1.0

1.1.1

1.3.0

1.3.3

1.3.4

1.3.5

1.3.6

1.3.7

1.4.0

1.5.0

1.5.1

1.5.2

1.5.3

1.5.4

1.6.0

1.6.1

1.6.2

1.6.3

1.6.4

1.7.0

1.7.1

1.8.0

2.0.0

2.0.0-rc.1

2.0.1

2.0.2

2.0.3

2.0.4

2.0.5

2.0.6

2.1.0

2.2.0

2.2.1

2.3.0

2.4.0

2.4.1

2.4.2

2.5.0

2.5.1

2.5.2

2.5.3

2.5.4

2.5.5

v1.0

v1.01

v1.2.0

v1.3.1

v1.3.2

Mono Color

• c26e390544 version bump master 2.5.5 David Koes 2026-05-22 11:33:04 -04:00
• 9c04fec027 Bump serialize-javascript and terser-webpack-plugin dependabot/npm_and_yarn/multi-0d13b2d87f dependabot[bot] 2026-03-29 11:41:23 +00:00
• 55b558c4fa Bump picomatch from 2.3.1 to 2.3.2 dependabot/npm_and_yarn/picomatch-2.3.2 dependabot[bot] 2026-03-25 22:11:48 +00:00
• bbe467e0e2 Bump flatted from 3.3.3 to 3.4.2 dependabot/npm_and_yarn/flatted-3.4.2 dependabot[bot] 2026-03-21 10:28:24 +00:00
• 392faa7c65 Merge pull request #852 from dxdc/aromatic-bonds-feature David Koes 2026-02-28 12:10:33 -05:00
• 782ec57028 Bump minimatch dependabot/npm_and_yarn/multi-770cfcd984 dependabot[bot] 2026-02-28 03:17:18 +00:00
• 98c3b746e9 fix: prevent crash when frames lack 3DMOL_STYLE blocks Daniel Caspi 2026-02-27 00:02:39 -06:00
• 2d0796f810 feat: add aromaticStyle option with torus rendering for aromatic rings Daniel Caspi 2026-02-25 14:51:52 -06:00
• fe6c8d2472 test: add tests for ring dashed bonds, SDF style parsing, and V3000 Daniel Caspi 2026-02-25 15:10:03 -06:00
• ab2b879cd6 feat: per-bond style overrides and DRY draw helpers Daniel Caspi 2026-02-25 15:09:28 -06:00
• 148e42461f feat: ring-aware dashed bond placement Daniel Caspi 2026-02-25 15:09:01 -06:00
• 2586225517 fix: align frame indices with modelDatas and apply embedded styles Daniel Caspi 2026-02-25 15:08:39 -06:00
• 309d3dbf72 feat: add 3DMOL_STYLE SDF property parsing and parser modernization Daniel Caspi 2026-02-25 15:08:09 -06:00
• 25143dbbff Bump basic-ftp from 5.1.0 to 5.2.0 dependabot/npm_and_yarn/basic-ftp-5.2.0 dependabot[bot] 2026-02-25 23:27:07 +00:00
• 8bb2f598a0 Merge pull request #850 from utkarshasinha/fix-hidden-hover-callback David Koes 2026-02-12 21:10:41 -05:00
• a99358b345 fix: skip hover callbacks for hidden objects utkarshasinha 2026-02-12 20:48:56 +05:30
• b9f8c3f24b Merge pull request #848 from dxdc/patch-4 David Koes 2026-02-02 21:57:24 -05:00
• 229914b482 Refactor bond drawing colors for consistency Daniel Caspi 2026-02-02 15:37:07 -06:00
• 0ca1bd2ceb Merge pull request #847 from dxdc/dashed-bonds-fix-2 David Koes 2026-01-31 13:31:03 -05:00
• 2242f1bb48 fix: stabilize dashed bond side selection across conformations Daniel Caspi 2026-01-31 00:20:52 -06:00
• 04a0849b13 Merge pull request #846 from dxdc/dashed-bonds-fix David Koes 2026-01-24 20:07:43 -05:00
• 8e3f3d67f2 fix: center dashed bonds Daniel Caspi 2026-01-23 16:33:35 -06:00
• 0c54f7570f fallback on bcif failure for mmtf type too David Koes 2026-01-21 20:53:25 -05:00
• 341ff319a3 packagelock 2.5.4 David Koes 2026-01-21 20:24:43 -05:00
• b65f8e62d3 version bump David Koes 2026-01-21 17:55:44 -05:00
• 0016c398e6 Bump tar and canvas dependabot/npm_and_yarn/multi-de3d1b050a dependabot[bot] 2026-01-21 22:06:32 +00:00
• 6784a97d00 updated versions David Koes 2026-01-21 16:57:02 -05:00
• f833fe94cb Merge branch 'dxdc-patch-3' David Koes 2026-01-21 16:46:08 -05:00
• e1ee2640d7 update img, packge.json David Koes 2026-01-21 16:45:41 -05:00
• eb0a5523be Merge branch 'patch-3' of https://github.com/dxdc/3Dmol.js into dxdc-patch-3 David Koes 2026-01-21 16:06:15 -05:00
• 9c9a07283b Update color variables for dashed bonds Daniel Caspi 2026-01-21 15:03:03 -06:00
• 29cc020664 Merge branch 'patch-3' of https://github.com/dxdc/3Dmol.js into dxdc-patch-3 David Koes 2026-01-21 15:17:03 -05:00
• 69f4a01f6f Update GLModel.ts Daniel Caspi 2026-01-20 15:54:56 -06:00
• c523665d8f Update GLModel.ts Daniel Caspi 2026-01-20 15:52:17 -06:00
• b5667441d7 make calculateDashes safe (no divide-by-zero) Daniel Caspi 2026-01-20 15:34:07 -06:00
• 1cc849ebe2 Refactor bond rendering logic in GLModel.ts Daniel Caspi 2026-01-20 15:24:34 -06:00
• aff893e4ad Refactor bond rendering for aromatic bond types Daniel Caspi 2026-01-20 15:17:36 -06:00
• 1db415155e Merge branch 'master' of github.com:3dmol/3Dmol.js David Koes 2026-01-05 15:26:16 -05:00
• d1cf3ba01f Merge pull request #842 from dxdc/dashed-bonds-2 David Koes 2026-01-05 15:25:57 -05:00
• 02c2e22e26 Revert "chore: enable capture-missing in glcheck" Daniel Caspi 2026-01-03 01:48:59 -06:00
• 6f65d9b969 edit for newer python David Koes 2026-01-02 21:45:41 -05:00
• fa5be597f1 Merge branch 'master' of github.com:3dmol/3Dmol.js David Koes 2026-01-02 21:45:17 -05:00
• 0442ec46cc fix: double-bond behavior Daniel Caspi 2025-12-31 21:32:11 -06:00
• 2d86862b7d test: add visual tests for partial bonds Daniel Caspi 2025-12-31 14:57:22 -06:00
• 4bb39f2153 chore: enable capture-missing in glcheck Daniel Caspi 2025-12-31 14:33:13 -06:00
• f0ba78b373 treat aromatic bond type (4) as 1.5 for rendering Daniel Caspi 2025-12-31 14:31:04 -06:00
• 8d32b76466 feat: add aromatic bond rendering support Daniel Caspi 2025-12-31 14:21:19 -06:00
• 5bc6441492 better doc ex dkoes 2025-10-05 13:35:47 -04:00
• 5f28e11ebf version bump David Koes 2025-09-27 13:27:48 -04:00
• 73e5b67138 Merge branch 'master' of github.com:3dmol/3Dmol.js 2.5.3 David Koes 2025-09-25 22:55:17 -04:00
• c433379854 Guard calls to this._gl.drawingBufferWidth with isLost check. David Koes 2025-09-25 22:53:40 -04:00
• 77c5fbdc32 version bump 2.5.2 David Koes 2025-07-30 12:18:42 -04:00
• e9465f52c0 test for Issue #835 David Koes 2025-07-30 12:03:59 -04:00
• d43797ca11 Fix Issue #835 David Koes 2025-07-30 11:49:42 -04:00
• de204a682d Fix Issue #745 David Koes 2025-07-30 10:48:17 -04:00
• b5e57487a7 Bump form-data from 4.0.2 to 4.0.4 dependabot/npm_and_yarn/form-data-4.0.4 dependabot[bot] 2025-07-22 05:28:44 +00:00
• f393cdeb4f version bump 2.5.1 David Koes 2025-06-26 11:23:11 -04:00
• 9dd8e4d649 Fix bug with animation timers David Koes 2025-06-26 17:01:50 +02:00
• dfeb17b766 Fix Issue #836 David Koes 2025-06-22 09:10:38 -04:00
• a3da5cd3fb switch to jsdelivr since cdnjs stopped updating months ago apparently David Koes 2025-06-03 15:25:17 -04:00
• 91824de00b Merge branch 'master' of github.com:3dmol/3Dmol.js David Koes 2025-06-03 11:46:59 -04:00
• 58f6a048fc move to self hosted runner for coverage David Koes 2025-06-03 11:46:45 -04:00
• 52e690d0b5 Update Coverage.yml David Koes 2025-06-03 10:59:41 -04:00
• 5ad8bbe9b3 Update Coverage.yml David Koes 2025-06-03 10:36:23 -04:00
• 7078b87717 coverageyml dkoes 2025-06-03 10:07:02 -04:00
• f2de920e57 fix coverage workflow David Koes 2025-06-02 23:08:17 -04:00
• 2deab5b399 serialize coverage David Koes 2025-06-02 22:45:22 -04:00
• d21aafcc24 stubborn David Koes 2025-06-02 22:30:59 -04:00
• da8494eea3 try and try again David Koes 2025-06-02 22:21:22 -04:00
• f0d25f2bb5 one more David Koes 2025-06-02 21:15:23 -04:00
• ce6e01bf7d giving up for now David Koes 2025-06-02 20:39:14 -04:00
• bfade7e98e ttt David Koes 2025-06-02 20:33:33 -04:00
• be22ab2f3f trytry David Koes 2025-06-02 20:29:46 -04:00
• 2d43b8f267 try this David Koes 2025-06-02 20:19:31 -04:00
• 6b34c2a4bb update workflows David Koes 2025-06-02 20:09:53 -04:00
• 8da1a5e0e7 update workflows David Koes 2025-06-02 19:46:53 -04:00
• 65fe4f2fcd fix publish David Koes 2025-06-02 19:34:43 -04:00
• 250e524797 another attempt to stop coverage from timing out in CI David Koes 2025-06-02 19:32:55 -04:00
• e94d0f3018 another attempt to get coverage working in CI 2.5.0 David Koes 2025-06-02 19:20:49 -04:00
• 1789c232ed version bump David Koes 2025-06-02 19:07:30 -04:00
• 130452961e Better prmtop parsing David Koes 2025-06-02 18:55:40 -04:00
• 27ee077c76 Cartoon gap visualization. David Koes 2025-06-02 16:36:17 -04:00
• c378116f85 attempts to get CI Coverage working reliably David Koes 2025-06-02 12:36:25 -04:00
• d67a03ecdc Merge pull request #765 from prajwalkulkarni/learning-environments David Koes 2025-06-02 11:48:37 -04:00
• f57361fdb8 Merge branch 'master' of github.com:3dmol/3Dmol.js David Koes 2025-06-02 11:04:37 -04:00
• 36b91c56b2 getviewer method David Koes 2025-06-02 10:17:04 -04:00
• e3d18d16e5 ref image David Koes 2025-06-02 10:16:55 -04:00
• b6bb5dd16f multimodel selection regression fix David Koes 2025-06-02 10:04:31 -04:00
• 32333ca369 Fix color regression and at matplotlib colors David Koes 2025-06-02 09:31:11 -04:00
• e9c51ee94c update cif snapshot David Koes 2025-06-01 22:40:08 -04:00
• d3be8c5077 ref image David Koes 2025-06-01 16:52:08 -04:00
• 3f8b67ceea cif label chains David Koes 2025-06-01 16:47:48 -04:00
• b6a615a2d4 Better selection. David Koes 2025-05-31 23:16:32 -04:00
• d40937e932 big grid test David Koes 2025-05-31 21:51:59 -04:00
• cf9a33b799 Use drawingBuffer sizes for grid calcs David Koes 2025-05-31 21:48:55 -04:00
• 5d6c5efa61 Not sure why the previous regenerated images were wrong.. hopefully these are correct. David Koes 2025-05-31 16:39:47 -04:00
• a7d322ef1b Better fog. David Koes 2025-05-31 15:40:59 -04:00
• bb793896cf Better symmetry support David Koes 2025-05-28 13:01:45 -04:00
• 7030ef27c3 Antialiasing improvements. David Koes 2025-05-27 17:26:00 -04:00
• a7e328065d Merge pull request #831 from AbCellera/master David Koes 2025-05-12 15:33:20 -04:00