Peter Eastman 9aae4bb35c PythonForce can be restricted to a subset of particles (#5246) ...

* PythonForce can be restricted to a subset of particles

* Fix exception with CUDA

2026-04-06 14:11:45 -07:00

..

ObcParameters.h

Eliminated RealOpenMM type

2017-01-13 14:59:10 -08:00

RealVec.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceAndersenThermostat.h

Eliminated RealOpenMM type

2017-01-13 14:59:10 -08:00

ReferenceAngleBondIxn.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceBondForce.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceBondIxn.h

Point based geometric functions for custom forces (#3037)

2021-02-28 11:33:59 -08:00

ReferenceBrownianDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceCCMAAlgorithm.h

Code cleanup (#5127)

2025-11-06 12:04:52 -08:00

ReferenceCMAPTorsionIxn.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceConstantPotential14.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceConstantPotential.h

Refactor reference PME (#5131)

2025-11-11 15:31:38 -08:00

ReferenceConstraintAlgorithm.h

Eliminated RealOpenMM type

2017-01-13 14:59:10 -08:00

ReferenceConstraints.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceCustomAngleIxn.h

Optimization to custom forces on CPU

2018-07-23 14:27:13 -07:00

ReferenceCustomBondIxn.h

Optimization to custom forces on CPU

2018-07-23 14:27:13 -07:00

ReferenceCustomCentroidBondIxn.h

Point based geometric functions for custom forces (#3037)

2021-02-28 11:33:59 -08:00

ReferenceCustomCompoundBondIxn.h

Point based geometric functions for custom forces (#3037)

2021-02-28 11:33:59 -08:00

ReferenceCustomCVForce.h

Use CompiledExpression for CustomCVForce energy expression (#3898)

2023-01-31 11:12:47 -08:00

ReferenceCustomDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceCustomExternalIxn.h

Optimization to custom forces on CPU

2018-07-23 14:27:13 -07:00

ReferenceCustomGBIxn.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceCustomHbondIxn.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceCustomManyParticleIxn.h

Point based geometric functions for custom forces (#3037)

2021-02-28 11:33:59 -08:00

ReferenceCustomNonbondedIxn.h

CustomNonbondedForce supports computed values (#3412)

2022-01-27 12:12:00 -08:00

ReferenceCustomTorsionIxn.h

Optimization to custom forces on CPU

2018-07-23 14:27:13 -07:00

ReferenceDPDDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceDynamics.h

DPDIntegrator (#4799)

2025-04-14 08:44:16 -07:00

ReferenceForce.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceGayBerneForce.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceHarmonicBondIxn.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceKernelFactory.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceKernels.h

PythonForce can be restricted to a subset of particles (#5246)

2026-04-06 14:11:45 -07:00

ReferenceLangevinMiddleDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceLCPOIxn.h

Add LCPO method (#5130)

2025-12-11 13:28:36 -08:00

ReferenceLincsAlgorithm.h

Eliminated RealOpenMM type

2017-01-13 14:59:10 -08:00

ReferenceLJCoulomb14.h

NonbondedForce can optionally apply periodic boundary conditions to exceptions

2020-02-21 15:20:48 -08:00

ReferenceLJCoulombIxn.h

Fixed error using periodic exceptions with PME (#2935)

2020-11-24 21:39:09 -08:00

ReferenceMinimize.h

GPU implementation of L-BFGS (#5198)

2026-02-10 09:22:10 -08:00

ReferenceMonteCarloBarostat.h

Added computeCurrentPressure() to MonteCarloBarostat (#4881)

2025-04-28 11:42:43 -07:00

ReferenceNeighborList.h

Eliminated RealOpenMM type

2017-01-13 14:59:10 -08:00

ReferenceNoseHooverChain.h

Clean up implementation of NHC, add propagator test

2019-10-24 08:04:17 -04:00

ReferenceNoseHooverDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceObc.h

Eliminated RealOpenMM type

2017-01-13 14:59:10 -08:00

ReferenceOrientationRestraintForce.h

Created OrientationRestraintForce (#5048)

2025-08-26 11:44:32 -07:00

ReferencePairIxn.h

Eliminated RealOpenMM type

2017-01-13 14:59:10 -08:00

ReferencePlatform.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferencePME.h

Refactor reference PME (#5131)

2025-11-11 15:31:38 -08:00

ReferencePointFunctions.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceProperDihedralBond.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceQTBDynamics.h

Adaptive quantum thermal bath (#4995)

2025-08-11 08:03:06 -07:00

ReferenceRbDihedralBond.h

Code cleanup to reference and CPU platforms

2018-07-03 09:59:51 -07:00

ReferenceRGForce.h

Radius of gyration force (#5031)

2025-08-14 08:26:25 -07:00

ReferenceRMSDForce.h

Created RMSD force and reference implementation

2018-01-22 10:19:43 -08:00

ReferenceSETTLEAlgorithm.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceTabulatedFunction.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

ReferenceVariableStochasticDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceVariableVerletDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceVerletDynamics.h

Virtual site for symmetric molecules (#4185)

2025-07-23 16:25:28 -07:00

ReferenceVirtualSites.h

Update file headers (#5074)

2025-09-23 10:27:26 -07:00

SimTKOpenMMRealType.h

Updated to latest values for physical constants (#2802)

2020-08-18 10:53:24 -07:00

SimTKOpenMMUtilities.h

Code cleanup (#5127)

2025-11-06 12:04:52 -08:00