/* -------------------------------------------------------------------------- * * OpenMM * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit. * * See https://openmm.org/development. * * * * Portions copyright (c) 2025 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "openmm/internal/AssertionUtilities.h" #include "openmm/Context.h" #include "openmm/CustomVolumeForce.h" #include "openmm/Platform.h" #include "openmm/VerletIntegrator.h" #include "sfmt/SFMT.h" #include using namespace OpenMM; using namespace std; void testVolume() { System system; Vec3 a(2, 0, 0); Vec3 b(0.1, 2, 0); Vec3 c(0.1, 0.1, 2); system.setDefaultPeriodicBoxVectors(a, b, c); system.addParticle(1.0); CustomVolumeForce* force = new CustomVolumeForce("2*v"); system.addForce(force); VerletIntegrator integrator(0.01); Context context(system, integrator, Platform::getPlatform("Reference")); context.setPositions({Vec3()}); OpenMM_SFMT::SFMT sfmt; init_gen_rand(0, sfmt); for (int i = 0; i < 10; i++) { a[0] = 2.0 + 0.1*genrand_real2(sfmt); b[1] = 2.0 + 0.1*genrand_real2(sfmt); c[2] = 2.0 + 0.1*genrand_real2(sfmt); b[0] = 0.1*genrand_real2(sfmt); c[0] = 0.1*genrand_real2(sfmt); c[1] = 0.1*genrand_real2(sfmt); context.setPeriodicBoxVectors(a, b, c); double energy = context.getState(State::Energy).getPotentialEnergy(); ASSERT_EQUAL_TOL(2*a[0]*b[1]*c[2], energy, 1e-6); } } void testBoxVectors() { System system; Vec3 a(2, 0, 0); Vec3 b(0.1, 2, 0); Vec3 c(0.1, 0.1, 2); system.setDefaultPeriodicBoxVectors(a, b, c); system.addParticle(1.0); CustomVolumeForce* force = new CustomVolumeForce("1 + ax + 2*bx + 3*by + 4*cx + 5*cy + 6*cz"); system.addForce(force); VerletIntegrator integrator(0.01); Context context(system, integrator, Platform::getPlatform("Reference")); context.setPositions({Vec3()}); OpenMM_SFMT::SFMT sfmt; init_gen_rand(0, sfmt); for (int i = 0; i < 10; i++) { a[0] = 2.0 + 0.1*genrand_real2(sfmt); b[1] = 2.0 + 0.1*genrand_real2(sfmt); c[2] = 2.0 + 0.1*genrand_real2(sfmt); b[0] = 0.1*genrand_real2(sfmt); c[0] = 0.1*genrand_real2(sfmt); c[1] = 0.1*genrand_real2(sfmt); context.setPeriodicBoxVectors(a, b, c); double energy = context.getState(State::Energy).getPotentialEnergy(); ASSERT_EQUAL_TOL(1+a[0]+2*b[0]+3*b[1]+4*c[0]+5*c[1]+6*c[2], energy, 1e-6); } } void testGlobalParameters() { System system; Vec3 a(2, 0, 0); Vec3 b(0, 2, 0); Vec3 c(0, 0, 3); system.setDefaultPeriodicBoxVectors(a, b, c); system.addParticle(1.0); CustomVolumeForce* force = new CustomVolumeForce("p1*ax + p2*cz"); force->addGlobalParameter("p1", 1.0); force->addGlobalParameter("p2", 1.0); system.addForce(force); VerletIntegrator integrator(0.01); Context context(system, integrator, Platform::getPlatform("Reference")); context.setPositions({Vec3()}); OpenMM_SFMT::SFMT sfmt; init_gen_rand(0, sfmt); for (int i = 0; i < 10; i++) { double p1 = genrand_real2(sfmt); double p2 = genrand_real2(sfmt); context.setParameter("p1", p1); context.setParameter("p2", p2); double energy = context.getState(State::Energy).getPotentialEnergy(); ASSERT_EQUAL_TOL(2*p1+3*p2, energy, 1e-6); } } int main(int argc, char* argv[]) { try { testVolume(); testBoxVectors(); testGlobalParameters(); } catch(const exception& e) { cout << "exception: " << e.what() << endl; return 1; } cout << "Done" << endl; return 0; }